Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902554.1_cds_XP_016452599.1_46824
CDS Infomation

[gene=LOC107777127] [db_xref=GeneID:107777127] [protein=flavonoid 3',5'-hydroxylase 1] [protein_id=XP_016452599.1] [location=complement(join(91801..92433,93025..93599,94121..94436))] [gbkey=CDS]
Sequence

ATGGTGCTATTTACTGAGCTTACTACAGCAGCTATAATTTTCCTTATATCACATATTCTC
ATTTCAACTCTTCTTTCAAAAACTACCGGCCGCCGCCGTCTCCCACCGGGCCCAAGGGGG
TGGCCGGTGATCGGCGCACTACCATACTTAGGAGCCATGCCACATGTTTCACTTGCAAAA
ATGGCCAAAGAATATGGACCTGTTATGTATTTAAAAGTTGGCACATGTGGCATGGCTGTT
GCTTCTACTCCTGATGCTGCTAAAGCATTCTTGAAAACACTTGATATCAACTTCTCCAAT
CGTCCACCTAATGCAGGCGCCACCCACTTGGCCTATAATGCACAAGACATGGTTTTTGCA
CACTATGGACCACGTTGGAAATTGCTAAGGAAATTGAGCAACTTGCATATGCTAGGGGGA
AAAGCTTTAGAAAATTGGGCAAATGTTCGTGCTAATGAGCTAGGACACATGCTAAAATCG
ATGTCCGAAATGAGCCGAGAAGGCGAGCGGGTGGTGGTGGCGGAGATGTTGACATTCGCC
ATGGCGAATATGATAGGACAAGTGATATTAAGCAAGCGAGTTTTCGCGAAAAAAGGTGCT
GAGGTTAATGAATTTAAGGATATGGTGGTGGAGTTAATGACAGTAGCAGGGTATTTTAAC
ATTGGAGATTTTATTCCTTTATTAGCTTGGTTGGATTTACAAGGAATTGAAAGAGGAATG
AAGAATTTACACAAGAAGTTTGATGCTTTGTTAACAAAGATGTTTGATGAACACAAGGAA
ACTAGCTATGAACGTAAAGGGAAAGAGGATTTTCTTGATGTTGTTATGGCAAATAGGGAT
AATTCTGAAGGCGAAAGGCTCAGTACAACTAATATCAAAGCACTTTTGCTGAATTTGTTC
ACCGCTGGTACAGACACTTCTTCTAGTGCAATAGAATGGGCACTTGCAGAAATGATGAAA
AATCGAAGAATTCTGAAAAAAGCACAAGCAGAAATGGATCAAGTTATTGGAAGAAATAGG
CGTTTACTTGAATCTGATATCCCAAATCTTCCTTATCTACGAGCAATTTGCAAAGAAACA
TTTCGAAAACATCCATCTACACCATTAAATCTCCCTAGAATCTCGAACGAACCATGTGAA
GTGAATGGTTATTACATACCAAAAAACACTAGATTGAGTGTTAATATTTGGGCGATTGGA
AGAGATTTTGATGTGTGGGAAAAACCACTAGAGTTCAATCCTGAAAGGTTCTTGAGTGGG
AAAAACGTGAAGATTGATCCAAGAGGGAACGATTTTGAGCTAATTCCATTTGGTGCAGGA
CGAAGAATTTGTGCAGGAACAAGAATGGGAATAGTAATGGTAGAGTATATATTGGGAACT
TTGGTTCATTCATTTGATTGGAAATTACCAAATGATGTTATTGATCTTAATATGGAGGAA
GCTTTTGGATTAGCTTTGCAGAAAGCTGTCCCTCTTCAAGCTATGGTTACTCCAAGATTA
ACTTTGGATGTTTATGCACCTTAG

Peptide Sequence

PEP ID

XP_016452599.1
PEP Infomation

PREDICTED: flavonoid 3',5'-hydroxylase 1 [Nicotiana tabacum]
Sequence

MVLFTELTTAAIIFLISHILISTLLSKTTGRRRLPPGPRGWPVIGALPYLGAMPHVSLAK
MAKEYGPVMYLKVGTCGMAVASTPDAAKAFLKTLDINFSNRPPNAGATHLAYNAQDMVFA
HYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMSEMSREGERVVVAEMLTFA
MANMIGQVILSKRVFAKKGAEVNEFKDMVVELMTVAGYFNIGDFIPLLAWLDLQGIERGM
KNLHKKFDALLTKMFDEHKETSYERKGKEDFLDVVMANRDNSEGERLSTTNIKALLLNLF
TAGTDTSSSAIEWALAEMMKNRRILKKAQAEMDQVIGRNRRLLESDIPNLPYLRAICKET
FRKHPSTPLNLPRISNEPCEVNGYYIPKNTRLSVNIWAIGRDFDVWEKPLEFNPERFLSG
KNVKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPNDVIDLNMEE
AFGLALQKAVPLQAMVTPRLTLDVYAP

Transcript Sequence

Gene sequence data has not been registered.